Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.44□□□□□ -0.42
CopeO89079 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CopeO89079 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.44□□□□□ -0.42
CopeO89079 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Gm24934-201ENSMUST00000103764 111 ntBASIC12.44□□□□□ -0.42
CopeO89079 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.44□□□□□ -0.42
CopeO89079 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.44□□□□□ -0.42
CopeO89079 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.44□□□□□ -0.42
CopeO89079 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.44□□□□□ -0.42
CopeO89079 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.44□□□□□ -0.42
CopeO89079 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.44□□□□□ -0.42
CopeO89079 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.44□□□□□ -0.42
CopeO89079 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.44□□□□□ -0.42
CopeO89079 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CopeO89079 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.43□□□□□ -0.42
CopeO89079 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.43□□□□□ -0.42
CopeO89079 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CopeO89079 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.43□□□□□ -0.42
CopeO89079 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.43□□□□□ -0.42
CopeO89079 Gm16177-201ENSMUST00000120728 718 ntBASIC12.43□□□□□ -0.42
CopeO89079 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.43□□□□□ -0.42
CopeO89079 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.43□□□□□ -0.42
CopeO89079 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.43□□□□□ -0.42
CopeO89079 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CopeO89079 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.43□□□□□ -0.42
CopeO89079 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.43□□□□□ -0.42
CopeO89079 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.43□□□□□ -0.42
CopeO89079 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopeO89079 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.42□□□□□ -0.42
CopeO89079 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.42□□□□□ -0.42
CopeO89079 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.42□□□□□ -0.42
CopeO89079 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Gm11591-201ENSMUST00000120063 702 ntBASIC12.42□□□□□ -0.42
CopeO89079 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.42□□□□□ -0.42
CopeO89079 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.42□□□□□ -0.42
CopeO89079 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms