Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf2O35218 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf2O35218 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf2O35218 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm14660-201ENSMUST00000119809 575 ntBASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm13875-201ENSMUST00000120162 282 ntBASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm14999-201ENSMUST00000121039 624 ntBASIC12.94□□□□□ -0.34
Cpsf2O35218 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.94□□□□□ -0.34
Cpsf2O35218 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.94□□□□□ -0.34
Cpsf2O35218 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.94□□□□□ -0.34
Cpsf2O35218 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf2O35218 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf2O35218 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Gm24830-201ENSMUST00000102024 166 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Gm35960-201ENSMUST00000202712 767 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Gm26232-201ENSMUST00000083360 166 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.93□□□□□ -0.34
Cpsf2O35218 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpsf2O35218 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf2O35218 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms