Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm8197-202ENSMUST00000193422 934 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm39288-201ENSMUST00000210554 446 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm23680-201ENSMUST00000083162 164 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm8146-201ENSMUST00000192106 1847 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm4294-201ENSMUST00000105169 614 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm30671-201ENSMUST00000214898 318 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 AC114645.1-201ENSMUST00000215831 187 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Gm43773-201ENSMUST00000198548 2162 ntBASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcf11G3X9Z4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Gm43242-201ENSMUST00000199507 1776 ntBASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Gm23694-201ENSMUST00000179335 110 ntBASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 AC122346.3-201ENSMUST00000223983 306 ntBASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Gm10263-201ENSMUST00000085163 300 ntBASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcf11G3X9Z4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Gm43760-201ENSMUST00000202120 3015 ntBASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Gm23218-201ENSMUST00000158124 276 ntBASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Gm17709-201ENSMUST00000174536 1096 ntBASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Gm29155-201ENSMUST00000185910 269 ntBASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcf11G3X9Z4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms