Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gm12501-201ENSMUST00000119163 529 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gm4868-201ENSMUST00000164138 789 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syngap1F6SEU4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm15573-201ENSMUST00000119487 540 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm15703-201ENSMUST00000120250 880 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm14585-201ENSMUST00000120713 634 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm12783-201ENSMUST00000121425 397 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm23771-201ENSMUST00000178702 110 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm4482-201ENSMUST00000200876 742 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syngap1F6SEU4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Syngap1F6SEU4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms