Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm44335-201ENSMUST00000196879 141 ntBASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm44297-201ENSMUST00000198304 141 ntBASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm44346-201ENSMUST00000198851 141 ntBASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm7774-201ENSMUST00000200064 533 ntBASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.88□□□□□ -0.67
Ccnb1ip1D3Z3K2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm4875-201ENSMUST00000118257 786 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm43002-201ENSMUST00000200310 155 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccnb1ip1D3Z3K2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccnb1ip1D3Z3K2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms