Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm25554-201ENSMUST00000158075 113 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm28833-201ENSMUST00000189671 559 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 AC168279.1-201ENSMUST00000214611 382 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 AC153152.3-201ENSMUST00000222188 1135 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Gm9369-201ENSMUST00000196009 733 ntBASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.21■□□□□ 0.03
Scn7aB1AYL1 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn7aB1AYL1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scn7aB1AYL1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.21■□□□□ 0.02
Scn7aB1AYL1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn7aB1AYL1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
Scn7aB1AYL1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scn7aB1AYL1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm12389-201ENSMUST00000117696 418 ntBASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Olfml3-204ENSMUST00000169286 874 ntBASIC15.2■□□□□ 0.02
Scn7aB1AYL1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm30946-201ENSMUST00000198288 724 ntBASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm43671-201ENSMUST00000200422 433 ntBASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 n-R5s185-201ENSMUST00000083953 119 ntBASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Gm45416-201ENSMUST00000209713 2201 ntBASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn7aB1AYL1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm28424-201ENSMUST00000187393 1319 ntBASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.19■□□□□ 0.02
Scn7aB1AYL1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms