Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm12036-201ENSMUST00000120008 530 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm42937-201ENSMUST00000197360 752 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc194A0A140LIT1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Gm28882-201ENSMUST00000185504 314 ntBASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc194A0A140LIT1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc194A0A140LIT1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms