Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm15487-201ENSMUST00000122373 465 ntBASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf4Q9QZS2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm16479-201ENSMUST00000121706 932 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm27331-201ENSMUST00000183705 60 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm9136-201ENSMUST00000193368 454 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm2423-201ENSMUST00000074863 733 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Gm24526-201ENSMUST00000082921 158 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf4Q9QZS2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Gm22189-201ENSMUST00000103822 86 ntBASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms