Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smco4Q9JIS3 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smco4Q9JIS3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smco4Q9JIS3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Smco4Q9JIS3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Smco4Q9JIS3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.64□□□□□ -0.87
Smco4Q9JIS3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Mir686-201ENSMUST00000102174 109 ntBASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.64□□□□□ -0.87
Smco4Q9JIS3 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Gm16372-201ENSMUST00000073088 450 ntBASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smco4Q9JIS3 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.63□□□□□ -0.87
Smco4Q9JIS3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Rprl2-201ENSMUST00000157150 290 ntBASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm16476-201ENSMUST00000221544 139 ntBASIC9.63□□□□□ -0.87
Smco4Q9JIS3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smco4Q9JIS3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms