Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm11941-201ENSMUST00000119904 610 ntBASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube3bQ9ES34 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm4310-201ENSMUST00000177847 889 ntBASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms