Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm12859-201ENSMUST00000117834 427 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm6447-201ENSMUST00000118905 835 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm13689-201ENSMUST00000119360 685 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm44397-201ENSMUST00000195950 113 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm6983-201ENSMUST00000214912 628 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Mir6392-201ENSMUST00000184924 108 ntBASIC11.6□□□□□ -0.55
Ube4bQ9ES00 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.6□□□□□ -0.55
Ube4bQ9ES00 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.6□□□□□ -0.55
Ube4bQ9ES00 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm18624-201ENSMUST00000220966 658 ntBASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ube4bQ9ES00 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ube4bQ9ES00 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms