Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gm23119-201ENSMUST00000158610 140 ntBASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gm18307-201ENSMUST00000206864 949 ntBASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hmgn3Q9DCB1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hmgn3Q9DCB1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.59
Hmgn3Q9DCB1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmgn3Q9DCB1 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms