Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.2□□□□□ -0.46
Sf3a3Q9D554 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Gm9022-201ENSMUST00000182482 992 ntBASIC12.2□□□□□ -0.46
Sf3a3Q9D554 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3a3Q9D554 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm15371-201ENSMUST00000117057 784 ntBASIC12.19□□□□□ -0.46
Sf3a3Q9D554 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm42612-201ENSMUST00000197986 623 ntBASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm43170-201ENSMUST00000199827 612 ntBASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm6983-201ENSMUST00000214912 628 ntBASIC12.19□□□□□ -0.46
Sf3a3Q9D554 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sf3a3Q9D554 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3a3Q9D554 Btrc-209ENSMUST00000224478 2194 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms