Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm8805-201ENSMUST00000117848 313 ntBASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm26185-201ENSMUST00000157692 266 ntBASIC12.15□□□□□ -0.46
Trim42Q9D2H5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim42Q9D2H5 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim42Q9D2H5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Trim42Q9D2H5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim42Q9D2H5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm4034-201ENSMUST00000187674 480 ntBASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim42Q9D2H5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms