Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 BC043934-202ENSMUST00000185694 2356 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm28693-202ENSMUST00000190758 331 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm2756-201ENSMUST00000195851 400 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm44882-201ENSMUST00000205702 802 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Itm2b-204ENSMUST00000228637 783 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm8396-201ENSMUST00000057361 823 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTRAFQ9CQE8 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.8□□□□□ -0.84
RTRAFQ9CQE8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms