Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Gm10146-201ENSMUST00000072739 309 ntBASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm11597-201ENSMUST00000121423 964 ntBASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm8515-201ENSMUST00000194852 576 ntBASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm7287-201ENSMUST00000205267 602 ntBASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm6180-201ENSMUST00000065243 498 ntBASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Krt88Q9CPR6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Krt88Q9CPR6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Krt88Q9CPR6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Krt88Q9CPR6 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.9□□□□□ -0.67
Krt88Q9CPR6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.9□□□□□ -0.67
Krt88Q9CPR6 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Gm12490-201ENSMUST00000120255 560 ntBASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Gm27701-201ENSMUST00000184498 110 ntBASIC10.89□□□□□ -0.67
Krt88Q9CPR6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Gm44958-201ENSMUST00000203734 736 ntBASIC10.89□□□□□ -0.67
Krt88Q9CPR6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Krt88Q9CPR6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms