Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm27847-201ENSMUST00000183711 107 ntBASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm27375-201ENSMUST00000183799 107 ntBASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm18304-201ENSMUST00000189162 546 ntBASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm12502-201ENSMUST00000120197 444 ntBASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm8018-201ENSMUST00000173536 789 ntBASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.87□□□□□ -0.51
Trim8Q99PJ2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim8Q99PJ2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim8Q99PJ2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms