Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.2□□□□□ -0.46
Cdk9Q99J95 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.2□□□□□ -0.46
Cdk9Q99J95 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.2□□□□□ -0.46
Cdk9Q99J95 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm11637-201ENSMUST00000120601 592 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm37042-201ENSMUST00000193816 581 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm38671-201ENSMUST00000200573 130 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm7287-201ENSMUST00000205267 602 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm8598-201ENSMUST00000221184 836 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.19□□□□□ -0.46
Cdk9Q99J95 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk9Q99J95 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Gm17150-201ENSMUST00000165577 381 ntBASIC12.18□□□□□ -0.46
Cdk9Q99J95 Gm37922-201ENSMUST00000195596 455 ntBASIC12.18□□□□□ -0.46
Cdk9Q99J95 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.18□□□□□ -0.46
Cdk9Q99J95 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.18□□□□□ -0.46
Cdk9Q99J95 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk9Q99J95 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.17□□□□□ -0.46
Cdk9Q99J95 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms