Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm11509-201ENSMUST00000117358 325 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12□□□□□ -0.49
Vsx1Q91V10 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Vsx1Q91V10 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12□□□□□ -0.49
Vsx1Q91V10 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm10731-201ENSMUST00000181171 448 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm43184-201ENSMUST00000197247 542 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 Gm44329-201ENSMUST00000197469 112 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm19091-201ENSMUST00000208120 978 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 AC138604.1-201ENSMUST00000226969 739 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12□□□□□ -0.49
Vsx1Q91V10 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12□□□□□ -0.49
Vsx1Q91V10 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Vsx1Q91V10 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vsx1Q91V10 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Adra1a-206ENSMUST00000225182 2337 ntBASIC12□□□□□ -0.49
Vsx1Q91V10 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm11801-201ENSMUST00000117807 746 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm1848-201ENSMUST00000120711 789 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm37299-201ENSMUST00000193951 826 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Gm10288-201ENSMUST00000084614 537 ntBASIC11.99□□□□□ -0.49
Vsx1Q91V10 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vsx1Q91V10 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm13600-201ENSMUST00000117949 744 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm14724-201ENSMUST00000118400 537 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm15595-201ENSMUST00000120840 961 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm13937-201ENSMUST00000121000 988 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm13182-201ENSMUST00000122241 312 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms