Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Gm8420-201ENSMUST00000097103 598 ntBASIC10.41□□□□□ -0.74
Tram1Q91V04 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.41□□□□□ -0.74
Tram1Q91V04 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tram1Q91V04 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tram1Q91V04 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm23119-201ENSMUST00000158610 140 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm42612-201ENSMUST00000197986 623 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm43170-201ENSMUST00000199827 612 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.4□□□□□ -0.74
Tram1Q91V04 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.4□□□□□ -0.74
Tram1Q91V04 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tram1Q91V04 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tram1Q91V04 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tram1Q91V04 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Tram1Q91V04 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Tram1Q91V04 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.4□□□□□ -0.75
Tram1Q91V04 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.39□□□□□ -0.75
Tram1Q91V04 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.39□□□□□ -0.75
Tram1Q91V04 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 Gm28631-201ENSMUST00000190740 334 ntBASIC10.39□□□□□ -0.75
Tram1Q91V04 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.39□□□□□ -0.75
Tram1Q91V04 Gm44958-201ENSMUST00000203734 736 ntBASIC10.39□□□□□ -0.75
Tram1Q91V04 Gm4768-201ENSMUST00000206199 686 ntBASIC10.39□□□□□ -0.75
Tram1Q91V04 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tram1Q91V04 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.39□□□□□ -0.75
Tram1Q91V04 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms