Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.02□□□□□ -0.17
StrcQ8VIM6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm27826-201ENSMUST00000175282 255 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm20781-201ENSMUST00000193154 693 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm21736-201ENSMUST00000195399 693 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm23769-201ENSMUST00000104441 121 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm43564-201ENSMUST00000196185 211 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm45527-201ENSMUST00000211052 774 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Gm9102-201ENSMUST00000219250 465 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 AC156790.2-201ENSMUST00000227115 568 ntBASIC14.01□□□□□ -0.17
StrcQ8VIM6 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
StrcQ8VIM6 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
StrcQ8VIM6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Gm15136-201ENSMUST00000120552 533 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Gm13827-201ENSMUST00000148801 372 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Gm37284-201ENSMUST00000193607 539 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 Ighv1-86-201ENSMUST00000200562 353 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 AC152169.1-201ENSMUST00000223901 701 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 AC159002.1-201ENSMUST00000226714 924 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Gm14132-201ENSMUST00000117188 1719 ntBASIC14□□□□□ -0.17
StrcQ8VIM6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14□□□□□ -0.17
StrcQ8VIM6 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
StrcQ8VIM6 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14□□□□□ -0.17
StrcQ8VIM6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Gm12337-201ENSMUST00000119634 400 ntBASIC13.99□□□□□ -0.17
StrcQ8VIM6 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.99□□□□□ -0.17
StrcQ8VIM6 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Gm42660-201ENSMUST00000197733 947 ntBASIC13.99□□□□□ -0.17
StrcQ8VIM6 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.99□□□□□ -0.17
StrcQ8VIM6 Gm8255-201ENSMUST00000218693 305 ntBASIC13.99□□□□□ -0.17
StrcQ8VIM6 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.99□□□□□ -0.17
StrcQ8VIM6 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.99□□□□□ -0.17
StrcQ8VIM6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms