Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm7029-201ENSMUST00000173226 450 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm44405-201ENSMUST00000198952 126 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm29705-201ENSMUST00000212598 474 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm45925-201ENSMUST00000218882 744 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm22058-201ENSMUST00000083393 310 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup35Q8R4R6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm22331-201ENSMUST00000158066 136 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm9136-201ENSMUST00000193368 454 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm5781-201ENSMUST00000219792 443 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm2423-201ENSMUST00000074863 733 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms