Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm18711-201ENSMUST00000199341 750 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.41□□□□□ -0.58
Clrn1Q8K445 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.41□□□□□ -0.58
Clrn1Q8K445 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.41□□□□□ -0.58
Clrn1Q8K445 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Gzmn-202ENSMUST00000225535 989 ntBASIC11.41□□□□□ -0.58
Clrn1Q8K445 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.41□□□□□ -0.58
Clrn1Q8K445 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.41□□□□□ -0.58
Clrn1Q8K445 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn1Q8K445 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm5070-201ENSMUST00000177599 862 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm27320-201ENSMUST00000184892 109 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm9230-201ENSMUST00000188228 532 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm43438-201ENSMUST00000198133 379 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm19994-201ENSMUST00000217086 586 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms