Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Gm19309-201ENSMUST00000218295 205 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Gm42627-201ENSMUST00000197347 224 ntBASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cchcr1Q8K2I2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm24845-201ENSMUST00000158034 109 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm5950-201ENSMUST00000213337 772 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm7046-201ENSMUST00000221351 977 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Morn2-202ENSMUST00000227729 656 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cchcr1Q8K2I2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms