Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm37666-201ENSMUST00000194110 866 ntBASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm7003-201ENSMUST00000195089 312 ntBASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc60Q8C4J0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gm45433-201ENSMUST00000209386 247 ntBASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc60Q8C4J0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm15610-201ENSMUST00000120584 195 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm24749-201ENSMUST00000157838 343 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm5616-201ENSMUST00000165252 384 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm8741-201ENSMUST00000174736 384 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Gm1995-201ENSMUST00000220838 2602 ntBASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms