Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Gm12380-201ENSMUST00000119012 544 ntBASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Gm15808-201ENSMUST00000119046 604 ntBASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Gm5705-201ENSMUST00000066241 711 ntBASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp44Q8C2S0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm23949-201ENSMUST00000104027 127 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm11509-201ENSMUST00000117358 325 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm8343-201ENSMUST00000182705 994 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm29615-201ENSMUST00000185371 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28224-201ENSMUST00000186078 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm29001-201ENSMUST00000186177 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28292-201ENSMUST00000186593 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28101-201ENSMUST00000187608 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm29076-201ENSMUST00000187689 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28302-201ENSMUST00000187931 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28646-201ENSMUST00000188220 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28205-201ENSMUST00000189177 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm29032-201ENSMUST00000189797 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm28695-201ENSMUST00000190300 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm37448-201ENSMUST00000192795 697 ntBASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp44Q8C2S0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms