Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm14723-201ENSMUST00000118686 215 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm31256-201ENSMUST00000194705 506 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm43758-201ENSMUST00000199500 367 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm19994-201ENSMUST00000217086 586 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf3Q8C120 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm11222-201ENSMUST00000119005 738 ntBASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Rprl1-201ENSMUST00000158050 327 ntBASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm42599-201ENSMUST00000201308 469 ntBASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm21769-201ENSMUST00000211922 111 ntBASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.61□□□□□ -0.39
Sh3rf3Q8C120 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf3Q8C120 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms