Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm32025-201ENSMUST00000217960 307 ntBASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc5a7Q8BGY9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm11439-201ENSMUST00000118598 409 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm37922-201ENSMUST00000195596 455 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm6007-201ENSMUST00000208170 823 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Syt7-204ENSMUST00000223586 1344 ntBASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc5a7Q8BGY9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Gm12151-201ENSMUST00000121374 290 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms