Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm17391-201ENSMUST00000171036 126 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.25□□□□□ -0.29
Ush1gQ80T11 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1gQ80T11 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm23596-201ENSMUST00000104304 132 ntBASIC13.24□□□□□ -0.29
Ush1gQ80T11 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm7851-201ENSMUST00000117574 323 ntBASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm8566-201ENSMUST00000120174 465 ntBASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm14460-201ENSMUST00000121511 639 ntBASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gm8285-201ENSMUST00000208293 759 ntBASIC13.24□□□□□ -0.29
Ush1gQ80T11 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.24□□□□□ -0.29
Ush1gQ80T11 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1gQ80T11 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms