Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm12616-201ENSMUST00000118594 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Mir3547-201ENSMUST00000175461 88 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12624-201ENSMUST00000177615 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12621-201ENSMUST00000177760 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12615-201ENSMUST00000177970 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12622-201ENSMUST00000177975 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12627-201ENSMUST00000178412 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12625-201ENSMUST00000179122 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12614-201ENSMUST00000179586 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm12613-201ENSMUST00000180323 382 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Mir6546-201ENSMUST00000184460 62 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt40Q6IFX3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm12579-201ENSMUST00000118040 783 ntBASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm24514-201ENSMUST00000174961 285 ntBASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt40Q6IFX3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm13916-201ENSMUST00000117368 628 ntBASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm6450-201ENSMUST00000200896 574 ntBASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Gm45770-201ENSMUST00000212105 616 ntBASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt40Q6IFX3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms