Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Gm8199-201ENSMUST00000121323 823 ntBASIC14.5□□□□□ -0.09
NfkbibQ60778 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Gm14441-201ENSMUST00000121960 540 ntBASIC14.5□□□□□ -0.09
NfkbibQ60778 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Gm2553-201ENSMUST00000215986 605 ntBASIC14.5□□□□□ -0.09
NfkbibQ60778 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.5□□□□□ -0.09
NfkbibQ60778 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.5□□□□□ -0.09
NfkbibQ60778 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NfkbibQ60778 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm23251-201ENSMUST00000103773 110 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm24891-201ENSMUST00000104391 136 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm13045-201ENSMUST00000119019 712 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm23699-201ENSMUST00000158835 135 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm18753-201ENSMUST00000201000 566 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Gm10288-201ENSMUST00000084614 537 ntBASIC14.49□□□□□ -0.09
NfkbibQ60778 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
NfkbibQ60778 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NfkbibQ60778 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.48□□□□□ -0.09
NfkbibQ60778 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.48□□□□□ -0.09
NfkbibQ60778 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.48□□□□□ -0.09
NfkbibQ60778 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.48□□□□□ -0.09
NfkbibQ60778 Gm9555-201ENSMUST00000200908 583 ntBASIC14.48□□□□□ -0.09
NfkbibQ60778 Nsd1-205ENSMUST00000224693 852 ntBASIC14.48□□□□□ -0.09
NfkbibQ60778 Spcs1-203ENSMUST00000226374 592 ntBASIC14.48□□□□□ -0.09
NfkbibQ60778 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.48□□□□□ -0.09
NfkbibQ60778 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
NfkbibQ60778 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.48□□□□□ -0.09
NfkbibQ60778 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NfkbibQ60778 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NfkbibQ60778 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NfkbibQ60778 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NfkbibQ60778 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NfkbibQ60778 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms