Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Brf2Q3UAW9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Brf2Q3UAW9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Brf2Q3UAW9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Brf2Q3UAW9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Brf2Q3UAW9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Brf2Q3UAW9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm13392-201ENSMUST00000117708 150 ntBASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm12036-201ENSMUST00000120008 530 ntBASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Rprl1-201ENSMUST00000158050 327 ntBASIC11.39□□□□□ -0.59
Brf2Q3UAW9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Brf2Q3UAW9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms