Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm11814-201ENSMUST00000119515 929 ntBASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm12138-201ENSMUST00000122180 951 ntBASIC10.74□□□□□ -0.69
Rab42Q0PD08 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm37922-201ENSMUST00000195596 455 ntBASIC10.74□□□□□ -0.69
Rab42Q0PD08 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm10012-201ENSMUST00000078252 192 ntBASIC10.74□□□□□ -0.69
Rab42Q0PD08 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.74□□□□□ -0.69
Rab42Q0PD08 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm27486-201ENSMUST00000184923 80 ntBASIC10.73□□□□□ -0.69
Rab42Q0PD08 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.73□□□□□ -0.69
Rab42Q0PD08 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rab42Q0PD08 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rab42Q0PD08 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rab42Q0PD08 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rab42Q0PD08 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rab42Q0PD08 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rab42Q0PD08 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms