Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm16166-201ENSMUST00000118291 787 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12616-201ENSMUST00000118594 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12624-201ENSMUST00000177615 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12621-201ENSMUST00000177760 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12615-201ENSMUST00000177970 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12622-201ENSMUST00000177975 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12627-201ENSMUST00000178412 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12625-201ENSMUST00000179122 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12614-201ENSMUST00000179586 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm12613-201ENSMUST00000180323 382 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm10731-201ENSMUST00000181171 448 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm5051-201ENSMUST00000204085 485 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Gm10288-201ENSMUST00000084614 537 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col9a2Q07643 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col9a2Q07643 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Gm14724-201ENSMUST00000118400 537 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.09□□□□□ -0.31
Col9a2Q07643 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col9a2Q07643 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 Gm6867-201ENSMUST00000219165 425 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.09□□□□□ -0.31
Col9a2Q07643 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col9a2Q07643 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col9a2Q07643 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Col9a2Q07643 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col9a2Q07643 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col9a2Q07643 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a2Q07643 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col9a2Q07643 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col9a2Q07643 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.08□□□□□ -0.32
Col9a2Q07643 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm18367-201ENSMUST00000176139 600 ntBASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm7467-201ENSMUST00000185173 652 ntBASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.08□□□□□ -0.32
Col9a2Q07643 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.08□□□□□ -0.32
Col9a2Q07643 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms