Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Gm6758-201ENSMUST00000119643 1055 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC7.95□□□□□ -1.14
PrkdcP97313 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm3945-201ENSMUST00000196637 683 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm4735-201ENSMUST00000138679 1302 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Gm5855-201ENSMUST00000200240 1305 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC7.94□□□□□ -1.14
PrkdcP97313 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC7.94□□□□□ -1.14
PrkdcP97313 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC7.94□□□□□ -1.14
PrkdcP97313 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm18733-202ENSMUST00000174447 401 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Gm38135-201ENSMUST00000195068 502 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 AC134869.4-202ENSMUST00000224350 837 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm7701-201ENSMUST00000163185 1479 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm42748-201ENSMUST00000199354 2341 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC7.94□□□□□ -1.14
PrkdcP97313 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Mir705-201ENSMUST00000102058 82 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
PrkdcP97313 Snord23-201ENSMUST00000116828 109 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
PrkdcP97313 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
PrkdcP97313 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 AC154747.3-201ENSMUST00000224471 3470 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
PrkdcP97313 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC7.94□□□□□ -1.14
PrkdcP97313 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm6794-201ENSMUST00000203829 457 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Gm23458-201ENSMUST00000083257 169 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
PrkdcP97313 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Gm45779-201ENSMUST00000212189 4064 ntBASIC7.94□□□□□ -1.14
PrkdcP97313 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PrkdcP97313 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms