Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Gm11222-201ENSMUST00000119005 738 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim43bP86448 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim43bP86448 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 Gm23363-201ENSMUST00000175024 79 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim43bP86448 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim43bP86448 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43bP86448 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43bP86448 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trim43bP86448 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.47□□□□□ -0.41
Trim43bP86448 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43bP86448 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43bP86448 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim43bP86448 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trim43bP86448 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.46□□□□□ -0.41
Trim43bP86448 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.46□□□□□ -0.41
Trim43bP86448 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.46□□□□□ -0.41
Trim43bP86448 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm14723-201ENSMUST00000118686 215 ntBASIC12.46□□□□□ -0.41
Trim43bP86448 Gm13492-201ENSMUST00000119772 665 ntBASIC12.46□□□□□ -0.41
Trim43bP86448 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.46□□□□□ -0.41
Trim43bP86448 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43bP86448 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim43bP86448 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43bP86448 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43bP86448 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43bP86448 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43bP86448 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim43bP86448 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43bP86448 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43bP86448 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43bP86448 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.46□□□□□ -0.42
Trim43bP86448 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trim43bP86448 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43bP86448 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms