Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Shox2P70390 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shox2P70390 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.93□□□□□ -0.5
Shox2P70390 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.93□□□□□ -0.5
Shox2P70390 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.93□□□□□ -0.5
Shox2P70390 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.93□□□□□ -0.5
Shox2P70390 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shox2P70390 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.93□□□□□ -0.5
Shox2P70390 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.93□□□□□ -0.5
Shox2P70390 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.93□□□□□ -0.5
Shox2P70390 Gm6007-201ENSMUST00000208170 823 ntBASIC11.93□□□□□ -0.5
Shox2P70390 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Gm8396-201ENSMUST00000057361 823 ntBASIC11.93□□□□□ -0.5
Shox2P70390 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shox2P70390 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.93□□□□□ -0.5
Shox2P70390 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.93□□□□□ -0.5
Shox2P70390 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.93□□□□□ -0.5
Shox2P70390 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shox2P70390 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.92□□□□□ -0.5
Shox2P70390 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.92□□□□□ -0.5
Shox2P70390 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.92□□□□□ -0.5
Shox2P70390 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.92□□□□□ -0.5
Shox2P70390 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.92□□□□□ -0.5
Shox2P70390 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Shox2P70390 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.92□□□□□ -0.5
Shox2P70390 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.92□□□□□ -0.5
Shox2P70390 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Shox2P70390 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.92□□□□□ -0.5
Shox2P70390 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Shox2P70390 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Shox2P70390 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Shox2P70390 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.92□□□□□ -0.5
Shox2P70390 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shox2P70390 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms