Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rad50P70388 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rad50P70388 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rad50P70388 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rad50P70388 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Rad50P70388 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rad50P70388 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rad50P70388 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rad50P70388 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rad50P70388 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rad50P70388 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.53□□□□□ -0.08
Rad50P70388 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.53□□□□□ -0.08
Rad50P70388 Gm13296-201ENSMUST00000117854 997 ntBASIC14.53□□□□□ -0.08
Rad50P70388 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Gm44262-201ENSMUST00000204969 372 ntBASIC14.53□□□□□ -0.08
Rad50P70388 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.53□□□□□ -0.08
Rad50P70388 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rad50P70388 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rad50P70388 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.52□□□□□ -0.08
Rad50P70388 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.52□□□□□ -0.08
Rad50P70388 Gm12217-201ENSMUST00000118858 696 ntBASIC14.52□□□□□ -0.08
Rad50P70388 Gm12036-201ENSMUST00000120008 530 ntBASIC14.52□□□□□ -0.08
Rad50P70388 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.52□□□□□ -0.08
Rad50P70388 Rprl1-201ENSMUST00000158050 327 ntBASIC14.52□□□□□ -0.08
Rad50P70388 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rad50P70388 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.52□□□□□ -0.08
Rad50P70388 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.52□□□□□ -0.08
Rad50P70388 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.52□□□□□ -0.08
Rad50P70388 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rad50P70388 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rad50P70388 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rad50P70388 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.52□□□□□ -0.09
Rad50P70388 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.52□□□□□ -0.09
Rad50P70388 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rad50P70388 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rad50P70388 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rad50P70388 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Rad50P70388 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.51□□□□□ -0.09
Rad50P70388 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.51□□□□□ -0.09
Rad50P70388 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Mir5120-201ENSMUST00000175020 78 ntBASIC14.51□□□□□ -0.09
Rad50P70388 Mir3547-201ENSMUST00000175461 88 ntBASIC14.51□□□□□ -0.09
Rad50P70388 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rad50P70388 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.51□□□□□ -0.09
Rad50P70388 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.51□□□□□ -0.09
Rad50P70388 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.51□□□□□ -0.09
Rad50P70388 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.51□□□□□ -0.09
Rad50P70388 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rad50P70388 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms