Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Pdlim4P70271 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.12□□□□□ -0.79
Pdlim4P70271 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Pdlim4P70271 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pdlim4P70271 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.12□□□□□ -0.79
Pdlim4P70271 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm23270-201ENSMUST00000104055 131 ntBASIC10.11□□□□□ -0.79
Pdlim4P70271 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm20482-202ENSMUST00000174729 825 ntBASIC10.11□□□□□ -0.79
Pdlim4P70271 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.11□□□□□ -0.79
Pdlim4P70271 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.11□□□□□ -0.79
Pdlim4P70271 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.11□□□□□ -0.79
Pdlim4P70271 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.11□□□□□ -0.79
Pdlim4P70271 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pdlim4P70271 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pdlim4P70271 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Pdlim4P70271 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Pdlim4P70271 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Pdlim4P70271 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Pdlim4P70271 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.1□□□□□ -0.79
Pdlim4P70271 Gm24255-201ENSMUST00000104481 128 ntBASIC10.1□□□□□ -0.79
Pdlim4P70271 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Pdlim4P70271 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Pdlim4P70271 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pdlim4P70271 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms