Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Crnkl1P63154 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Crnkl1P63154 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Crnkl1P63154 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Crnkl1P63154 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Crnkl1P63154 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Crnkl1P63154 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crnkl1P63154 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Crnkl1P63154 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.97□□□□□ -0.49
Crnkl1P63154 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm17150-201ENSMUST00000165577 381 ntBASIC11.97□□□□□ -0.49
Crnkl1P63154 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm27847-201ENSMUST00000183711 107 ntBASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm27375-201ENSMUST00000183799 107 ntBASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Crnkl1P63154 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crnkl1P63154 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.96□□□□□ -0.49
Crnkl1P63154 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Crnkl1P63154 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
Crnkl1P63154 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.96□□□□□ -0.49
Crnkl1P63154 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Crnkl1P63154 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Crnkl1P63154 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Crnkl1P63154 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Crnkl1P63154 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms