Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm5P62322 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm5P62322 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Gm11618-201ENSMUST00000117946 267 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Gm15487-201ENSMUST00000122373 465 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Gm17208-201ENSMUST00000168388 535 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Gm22121-201ENSMUST00000175148 54 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Gm9022-201ENSMUST00000182482 992 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Gm18307-201ENSMUST00000206864 949 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.04□□□□□ -0.8
Lsm5P62322 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm5P62322 Gm24136-201ENSMUST00000083374 165 ntBASIC10.04□□□□□ -0.8
Lsm5P62322 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm5P62322 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm5P62322 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm5P62322 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Lsm5P62322 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm26185-201ENSMUST00000157692 266 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm27838-201ENSMUST00000184829 128 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm2756-201ENSMUST00000195851 400 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm5P62322 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm5P62322 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.03□□□□□ -0.8
Lsm5P62322 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm5P62322 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms