Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.26■□□□□ 0.03
Msh6P54276 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.26■□□□□ 0.03
Msh6P54276 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh6P54276 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Msh6P54276 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Msh6P54276 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Msh6P54276 Gm13916-201ENSMUST00000117368 628 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.25■□□□□ 0.03
Msh6P54276 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.25■□□□□ 0.03
Msh6P54276 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Gm9645-201ENSMUST00000197131 792 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Gm6867-201ENSMUST00000219165 425 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
Msh6P54276 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Msh6P54276 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Msh6P54276 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Msh6P54276 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Msh6P54276 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Msh6P54276 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.25■□□□□ 0.03
Msh6P54276 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Msh6P54276 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh6P54276 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Msh6P54276 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.24■□□□□ 0.03
Msh6P54276 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Gm44158-201ENSMUST00000203881 505 ntBASIC15.24■□□□□ 0.03
Msh6P54276 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 AC166341.2-201ENSMUST00000220571 120 ntBASIC15.24■□□□□ 0.03
Msh6P54276 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.24■□□□□ 0.03
Msh6P54276 Gm13937-201ENSMUST00000121000 988 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms