Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.37□□□□□ -0.43
SftpbP50405 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Gm8762-201ENSMUST00000193486 339 ntBASIC12.37□□□□□ -0.43
SftpbP50405 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.37□□□□□ -0.43
SftpbP50405 Gm42937-201ENSMUST00000197360 752 ntBASIC12.37□□□□□ -0.43
SftpbP50405 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SftpbP50405 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SftpbP50405 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.37□□□□□ -0.43
SftpbP50405 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SftpbP50405 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.37□□□□□ -0.43
SftpbP50405 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.37□□□□□ -0.43
SftpbP50405 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SftpbP50405 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SftpbP50405 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.36□□□□□ -0.43
SftpbP50405 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.36□□□□□ -0.43
SftpbP50405 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.36□□□□□ -0.43
SftpbP50405 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SftpbP50405 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SftpbP50405 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.36□□□□□ -0.43
SftpbP50405 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.36□□□□□ -0.43
SftpbP50405 Gm27023-201ENSMUST00000182372 285 ntBASIC12.36□□□□□ -0.43
SftpbP50405 Gm27731-201ENSMUST00000185192 107 ntBASIC12.36□□□□□ -0.43
SftpbP50405 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.36□□□□□ -0.43
SftpbP50405 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.36□□□□□ -0.43
SftpbP50405 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SftpbP50405 Snora73a-201ENSMUST00000082453 205 ntBASIC12.36□□□□□ -0.43
SftpbP50405 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SftpbP50405 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SftpbP50405 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SftpbP50405 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.36□□□□□ -0.43
SftpbP50405 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SftpbP50405 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.36□□□□□ -0.43
SftpbP50405 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.36□□□□□ -0.43
SftpbP50405 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SftpbP50405 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SftpbP50405 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SftpbP50405 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SftpbP50405 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.35□□□□□ -0.43
SftpbP50405 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.35□□□□□ -0.43
SftpbP50405 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.35□□□□□ -0.43
SftpbP50405 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SftpbP50405 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SftpbP50405 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.35□□□□□ -0.43
SftpbP50405 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SftpbP50405 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.35□□□□□ -0.43
SftpbP50405 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SftpbP50405 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms