Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Gm23912-201ENSMUST00000104687 87 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.32□□□□□ -0.6
Ptx3P48759 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.32□□□□□ -0.6
Ptx3P48759 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.32□□□□□ -0.6
Ptx3P48759 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.32□□□□□ -0.6
Ptx3P48759 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Gm9630-201ENSMUST00000178304 885 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ptx3P48759 Gm28071-201ENSMUST00000190355 478 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.32□□□□□ -0.6
Ptx3P48759 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.32□□□□□ -0.6
Ptx3P48759 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ptx3P48759 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ptx3P48759 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ptx3P48759 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.31□□□□□ -0.6
Ptx3P48759 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Gm17040-202ENSMUST00000170597 889 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Gm43138-201ENSMUST00000199123 708 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ptx3P48759 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ptx3P48759 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.31□□□□□ -0.6
Ptx3P48759 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ptx3P48759 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ptx3P48759 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.3□□□□□ -0.6
Ptx3P48759 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.3□□□□□ -0.6
Ptx3P48759 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Gm22133-201ENSMUST00000102082 109 ntBASIC11.3□□□□□ -0.6
Ptx3P48759 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ptx3P48759 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ptx3P48759 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms