Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Rfx3P48381 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rfx3P48381 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Rfx3P48381 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Rfx3P48381 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rfx3P48381 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.94□□□□□ -0.66
Rfx3P48381 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm24548-201ENSMUST00000158650 108 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm18304-201ENSMUST00000189162 546 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Gm37008-201ENSMUST00000195712 319 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rfx3P48381 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.94□□□□□ -0.66
Rfx3P48381 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfx3P48381 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Rfx3P48381 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.94□□□□□ -0.66
Rfx3P48381 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfx3P48381 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.93□□□□□ -0.66
Rfx3P48381 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rfx3P48381 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Rfx3P48381 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.93□□□□□ -0.66
Rfx3P48381 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Gm5370-201ENSMUST00000187187 574 ntBASIC10.93□□□□□ -0.66
Rfx3P48381 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.93□□□□□ -0.66
Rfx3P48381 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.93□□□□□ -0.66
Rfx3P48381 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rfx3P48381 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms