Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rfx2P48379 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.71□□□□□ -0.37
Rfx2P48379 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Gm24231-201ENSMUST00000104315 133 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Gm12266-201ENSMUST00000120311 962 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rfx2P48379 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.71□□□□□ -0.37
Rfx2P48379 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Gm44958-201ENSMUST00000203734 736 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Gm9996-201ENSMUST00000070359 913 ntBASIC12.71□□□□□ -0.37
Rfx2P48379 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx2P48379 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rfx2P48379 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rfx2P48379 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rfx2P48379 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.71□□□□□ -0.38
Rfx2P48379 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rfx2P48379 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rfx2P48379 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rfx2P48379 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfx2P48379 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfx2P48379 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.7□□□□□ -0.38
Rfx2P48379 Gm24749-201ENSMUST00000157838 343 ntBASIC12.7□□□□□ -0.38
Rfx2P48379 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfx2P48379 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.7□□□□□ -0.38
Rfx2P48379 Mir6979-201ENSMUST00000183927 56 ntBASIC12.7□□□□□ -0.38
Rfx2P48379 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.7□□□□□ -0.38
Rfx2P48379 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rfx2P48379 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rfx2P48379 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.7□□□□□ -0.38
Rfx2P48379 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfx2P48379 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms