Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rpl28P41105 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rpl28P41105 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Gm11637-201ENSMUST00000120601 592 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.14□□□□□ -1.11
Rpl28P41105 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.14□□□□□ -1.11
Rpl28P41105 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl28P41105 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Rpl28P41105 CT025681.1-201ENSMUST00000225453 1855 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Rpl28P41105 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC8.14□□□□□ -1.11
Rpl28P41105 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.14□□□□□ -1.11
Rpl28P41105 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl28P41105 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm43963-201ENSMUST00000203466 2488 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 AC126262.1-201ENSMUST00000221802 1904 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Rpl28P41105 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm14921-201ENSMUST00000118643 908 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
Rpl28P41105 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Proscos-202ENSMUST00000178990 666 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 H2-Pa-201ENSMUST00000182803 626 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Gm27847-201ENSMUST00000183711 107 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Gm27375-201ENSMUST00000183799 107 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Gm8099-201ENSMUST00000200510 742 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms