Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.4□□□□□ -0.42
Mmp13P33435 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm7046-201ENSMUST00000221351 977 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm22058-201ENSMUST00000083393 310 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Mmp13P33435 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
Mmp13P33435 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Mmp13P33435 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Mmp13P33435 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.39□□□□□ -0.43
Mmp13P33435 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.39□□□□□ -0.43
Mmp13P33435 Gm13297-201ENSMUST00000120205 934 ntBASIC12.39□□□□□ -0.43
Mmp13P33435 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.39□□□□□ -0.43
Mmp13P33435 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.39□□□□□ -0.43
Mmp13P33435 Mir8109-201ENSMUST00000184375 117 ntBASIC12.39□□□□□ -0.43
Mmp13P33435 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Mmp13P33435 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Mmp13P33435 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Mmp13P33435 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Mmp13P33435 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp13P33435 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.38□□□□□ -0.43
Mmp13P33435 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.38□□□□□ -0.43
Mmp13P33435 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.38□□□□□ -0.43
Mmp13P33435 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm8018-201ENSMUST00000173536 789 ntBASIC12.38□□□□□ -0.43
Mmp13P33435 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.38□□□□□ -0.43
Mmp13P33435 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.38□□□□□ -0.43
Mmp13P33435 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.38□□□□□ -0.43
Mmp13P33435 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.38□□□□□ -0.43
Mmp13P33435 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Mmp13P33435 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Mmp13P33435 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms