Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 B9d1os-201ENSMUST00000137010 674 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.78□□□□□ -0.52
Hoxc11P31313 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Gm3786-201ENSMUST00000202659 378 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Gm18730-201ENSMUST00000218038 343 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxc11P31313 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxc11P31313 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxc11P31313 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxc11P31313 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxc11P31313 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxc11P31313 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Hoxc11P31313 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hoxc11P31313 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm24231-201ENSMUST00000104315 133 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm23200-201ENSMUST00000104379 132 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm17040-202ENSMUST00000170597 889 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm19994-201ENSMUST00000217086 586 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm9996-201ENSMUST00000070359 913 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hoxc11P31313 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxc11P31313 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.77□□□□□ -0.53
Hoxc11P31313 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.76□□□□□ -0.53
Hoxc11P31313 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Gm24934-201ENSMUST00000103764 111 ntBASIC11.76□□□□□ -0.53
Hoxc11P31313 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Hoxc11P31313 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxc11P31313 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxc11P31313 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Hoxc11P31313 Gm12266-201ENSMUST00000120311 962 ntBASIC11.76□□□□□ -0.53
Hoxc11P31313 Gm9083-201ENSMUST00000120423 819 ntBASIC11.76□□□□□ -0.53
Hoxc11P31313 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.76□□□□□ -0.53
Hoxc11P31313 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxc11P31313 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms