Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.59□□□□□ -0.39
H2afxP27661 Gm8805-201ENSMUST00000117848 313 ntBASIC12.59□□□□□ -0.39
H2afxP27661 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.59□□□□□ -0.39
H2afxP27661 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2afxP27661 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2afxP27661 Gm42693-201ENSMUST00000196779 631 ntBASIC12.59□□□□□ -0.39
H2afxP27661 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Gm9797-201ENSMUST00000052902 613 ntBASIC12.59□□□□□ -0.39
H2afxP27661 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.59□□□□□ -0.39
H2afxP27661 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.59□□□□□ -0.39
H2afxP27661 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H2afxP27661 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2afxP27661 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afxP27661 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
H2afxP27661 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afxP27661 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.58□□□□□ -0.39
H2afxP27661 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H2afxP27661 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afxP27661 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
H2afxP27661 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2afxP27661 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
H2afxP27661 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.58□□□□□ -0.4
H2afxP27661 Gm13123-201ENSMUST00000122173 492 ntBASIC12.58□□□□□ -0.4
H2afxP27661 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.58□□□□□ -0.4
H2afxP27661 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afxP27661 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.58□□□□□ -0.4
H2afxP27661 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afxP27661 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.58□□□□□ -0.4
H2afxP27661 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afxP27661 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H2afxP27661 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2afxP27661 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afxP27661 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
H2afxP27661 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.57□□□□□ -0.4
H2afxP27661 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H2afxP27661 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm24830-201ENSMUST00000102024 166 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm13453-201ENSMUST00000118708 357 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
H2afxP27661 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm17208-201ENSMUST00000168388 535 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afxP27661 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm26232-201ENSMUST00000083360 166 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.57□□□□□ -0.4
H2afxP27661 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afxP27661 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.57□□□□□ -0.4
H2afxP27661 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.57□□□□□ -0.4
H2afxP27661 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms